************************************************ * Seminal vesicle protein II repeats signature * ************************************************ Seminal vesicle protein II (SVP-II) [1] is one of the six major secretory proteins secreted by rat seminal vesicle. It is a clotting protein that serves as the substrate in the formation of the copulatory plug. Covalent clotting of this protein is catalyzed by a transglutaminase and involves the formation of gamma-glutamyl-epsilon-lysine crosslinks. SVS-II sequence contains thirteen repeats of a thirteen amino acid residue domain which is probably involved in the cross-linking. There are a number of invariant residues in this domain, four of them (two lysines and two glutamines) probably participate in the cross-links. The pattern we have developed comprises positions 2 to 12 of the domain and includes the four putative cross-linking residues. -Consensus pattern: [GSA]-Q-x-K-S-[FY]-x-Q-x-K-[SA] [Q's and K's are probably involved in cross-links] -Sequences known to belong to this class detected by the pattern: ALL; it will detect 12 of the 13 occurrences of the repeat. -Other sequence(s) detected in SWISS-PROT: NONE. -Last update: December 1991 / First entry. [ 1] Harris S.E., Harris M.A., Johnson C.M., Bean M.F., Dodd J.G., Matusik R.J., Carr S.A., Crabb J.W. J. Biol. Chem. 265:9896-9903(1990).