******************************************************** * Prokaryotic zinc-dependent phospholipase C signature * ******************************************************** Bacillus cereus expresses a phosphatidylcholine hydrolyzing phospholipase C (EC 3.1.4.3) (PLC) which is a monomeric protein of 245 amino-acid residues that binds three zinc ions [1]. This PLC is highly similar to the following proteins: - Alpha-toxin from Clostridium perfringens and bifermentans which are also zinc-dependent phospholipases C [2]. - Lecithinase C from Listeria monocytogenes [3]. In Bacillus cereus, there are nine residues known to be involved in binding the zinc ions: 5 His, 2 Asp, 1 Glu and 1 Trp. These residues are all conserved in the Clostridium alpha-toxin. As a signature pattern for this family of enzymes, we selected a conserved region of 11 residues that contains three of the zinc ligands: a histidine involved in binding the first zinc ion, an aspartic acid which binds both the first and the third zinc ion, and a histidine which binds the second zinc ion. -Consensus pattern: H-Y-x-[GT]-D-[LIVM]-[DNS]-x-P-x-H-[PA]-x-N [The two H's and the D bind zinc] -Sequences known to belong to this class detected by the pattern: ALL. -Other sequence(s) detected in SWISS-PROT: NONE. -Last update: June 1994 / Pattern and text revised. [ 1] Hough E., Hansen L.K., Birknes B., Jynge K., Hansen S., Hordvik A., Little C., Dodson E., Derewenda Z. Nature 338:358-360(1989). [ 2] Titball R.W., Rubidge T. FEMS Microbiol. Lett. 68:261-266(1990). [ 3] Vazquez-Boland J.-A., Kocks C., Dramsi S., Ohayon H., Geoffroy C., Mengaud J., Cossart P. Infect. Immun. 60:219-230(1992).