;########################################################## ; ; PSB catalog Version 1.11 ; ; © 1997 Stefano Peruzzi - All rights reserved. ; ;########################################################## ; ; MSG_REG (//) Unregistered user ; MSG_OK (//) OKAY ; MSG_REXXPORT (//) ARexx port: ; MSG_MAINWIN (//) PSB Window ; LB_ABOUTW (//) About PSB ; LB_REQW (//) Requester window ; MSG_YN (//) Okay|Cancel ; MSG_REQSAVE (//) Really save this doc? ; MSG_REQPRINT (//) Really print this doc? ; MSG_WIN (//) Prosite Browser ; LB_PDOC (//) PDOC ; HLP_PDOC (//) PDOC access number. ; LB_ENTRY (//) Entry ; HLP_POPUP (//) Selection of database entries. ; LB_WELCOME (//) Welcome ! ; HLP_TITLE (//) Title of current PDoc entry. ; LB_BROWSE (//) Browse ; BT_BIOINFO (//) BioInfo ; HLP_BIOINFO (//) Toggles between PDoc and information text. ; BT_FIRST (//) First ; HLP_FIRST (//) Loads first entry of database. ; HLP_ARROWLEFT (//) Steps backward. ; HLP_ARROWRIGHT (//) Steps forward. ; BT_LAST (//) Last ; HLP_LAST (//) Loads last entry of database. ; BT_FIND (//) Find ; HLP_FIND (//) Scans whole prosite database for pattern. ; HLP_PATTERN (//) String pattern to look for. ; HLP_POPBUF (//) Allows selection of buffer entries. ; HLP_BUF (//) Shows the selected buffer entry. ; HLP_PREV (//) Previous search buffer. ; HLP_NEXT (//) Next search buffer. ; HLP_TEXTWIN (//) Shows the selected entry. ; LB_LOADING (//) \033c\0338 Loading Databases \nPlease Wait ; MSG_GAUGE(//) %ld %% completed ; MSG_GAUGE2 (//) \033c\033bScanning database. ; LB_INDEX (//) Create now! ; ER_INDEX (//) Cannot find PROGDIR:data/psb.idx ; LB_WAIT (//) Please wait ... ; LB_INDEXGEN (//) \033c\033bpsb.idx generation ; ER_SAVEINDEX (//) Failed to save PROGDIR:data/psb.idx ; ER_PDOC (//) This PDOC does not exist. ; LB_SAVEWIN (//) Save current pdoc entry ; BT_PRINT (//) Print ; HLP_PRINT (//) Prints the selected entry. ; BT_SAVE (//) Save ; HLP_SAVE (//) Saves the selected entry. ; BT_SAVEAS (//) Save As ; HLP_SAVEAS (//) Saves the selected entry with requester. ; MN_PROJECT (//) Project ; MN_ABOUT (//) About PSB ; MN_USERINFO(//) User Info ; MN_SAVE (//) Save ; MN_SAVEAS (//) Save as ... ; MN_PRINT (//) Print ; MN_MUIPREFS (//) MUI Prefs ; MN_ICONIFY (//) Iconify ; MN_QUIT (//) Quit ; MSG_INFO (//) Informations ; ER_NOPAT (//) Missed pattern! ; ER_NOTFOUND (//) Pattern not found! ; ER_POOL (//) Can't allocate memory pool!\n ; ER_MEM (//) Can't allocate memory!\n ; ER_WIN (//) Failed to open window! ; ER_GUI (//) Can't open user interface!\n ; ER_MUI (//) Can't open muimaster.library!\n ; ER_PRINTDEV (//) Failed opening printer.device! ; ER_PRINTPAR (//) Parallel Printer is off-line! ; ER_PRINTSER (//) Serial Printer is off-line! ; ER_SAVE (//) Error saving file! ; ER_LOAD (//) Error loading file! ; ER_NOTMEM (//) Not enough memory! ; ER_PROSITE (//) Failed to open PROGDIR:data/prosite.doc ; ;################################ ; ; General Information Document ; ;################################ ; TXT_BIODOC (//) \033n\033l\ \338 Definition of a PROSITE pattern:\0331\n\ \n\ - The standard IUPAC one-letter codes for the amino acids are used.\n\ - The symbol `x' is used for a position where any amino acid is accepted.\n\ - Ambiguities are indicated by listing the acceptable amino acids for a\n\ given position, between square parentheses `[ ]'. For example: [ALT]\n\ stands for Ala or Leu or Thr. \n\ - Ambiguities are also indicated by listing between a pair of curly\n\ brackets `{ }' the amino acids that are not accepted at a given\n\ position. For example: {AM} stands for any amino acid except Ala and\n\ Met. \n\ - Each element in a pattern is separated from its neighbor by a `-'. \n\ - Repetition of an element of the pattern can be indicated by following\n\ that element with a numerical value or a numerical range between\n\ parenthesis. Examples: x(3) corresponds to x-x-x, x(2,4) corresponds to\n\ x-x or x-x-x or x-x-x-x. \n\ - When a pattern is restricted to either the N- or C-terminal of a\n\ sequence, that pattern either starts with a `<' symbol or respectively\n\ ends with a `>' symbol. \n\ - A period ends the pattern. \ \n\ \n\ \033n\ \0338 IUPAC code for aminoacids and nucleotides\0331\n\ \033n\n\ \033bA Ala \033nAlanine \033bR Arg \033nArginine \033bN Asn \033nAsparagine\n\ \033bD Asp \033nAspartic acid \033bC Cys \033nCysteine \033bQ Gln \033nGlutamine\n\ \033bE Glu \033nGlutamic acid \033bG Gly \033nGlycin \033bH His \033nHistidine\n\ \033bI Ile \033nIsoleucine \033bL Leu \033nLeucine \033bK Lys \033nLysine\n\ \033bM Met \033nMethionine \033bF Phe \033nPhenylalanine \033bP Pro \033nProline\n\ \033bS Ser \033nSerine \033bT Thr \033nThreonine \033bW Trp \033nTryptophan\n\ \033bY Tyr \033nTyrosine \033bV Val \033nValine \033bB Asx \033n(Asp or Asn)\n\ \033bZ Glx \033n(Glu or Gln) \033b Alb \033nBeta Alanine \033b Hyp \033nHydroxyproline\n\ \033b Pca \033nPyrrolidone \033b Pga \033nPyroglutamate \033b Acd \033nAcidic\n\ \033b Ali \033nAliphatic \033b Aro \033nAromatic \033b Bas \033nBasic\n\ \n\ \033bG \033nGuanine \033bA \033nAdenine \033bC \033nCytosine \033bT \033nThymine \033bU \033nUracil\n\ \n\ \033bR \033nPuryne (G/A) \033bY \033nPyrimidine (T/U/C)\n\ \033bM \033nAmino (A/C) \033bK \033nKeto (G/T/U)\n\ \033bH \033nNot-G (A/C/T/U) \033bB \033nNot-A (G/T/U/C)\n\ \033bV \033nNot-T/U (G/C/A) \033bD \033nNot-C (G/A/T)\n\ \033bS \033nStrong interaction, 3 H-bonds (G/C)\n\ \033bW \033nWeak interaction, 2 H-bonds (A/T/U)\n\ \033bN \033nAny (G/A/C/T/U)\n\ \n\n ; ;--------- End of BioDoc ------------ ;